Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTCCAGCTGCGGAGCTGGTC
.(((((((((...((((((((.&)))).))))....))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_031990
GeneSymbolPTBP1
Binding site2269,2292
Score0.923
Seed1
Au0.441
Energy-24.3
Binding len23
Me-11.254
Phylopstem0.36272023333333336
Phylopflank0.5643735112500001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure