Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGAAGGGGCGGGCGTGTCG
.((((((((..(((((((...&))))))).)))))...))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_031991
GeneSymbolPTBP1
Binding site2549,2569
Score0.846
Seed1
Au0.324
Energy-24.8
Binding len20
Me-7.861
Phylopstem-0.2885900818181818
Phylopflank-0.018782867499999988
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end5
Position3UTR
2D Structure