Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGATGGTGCGGGG
..((.((.((.((((((((...&)))))))).)).)).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_031993
GeneSymbolPCDHGA1
Binding site1131,1149
Score0.846
Seed0
Au0.544
Energy-23.3
Binding len18
Me-14.214
Phylopstem1.4318031249999996
Phylopflank0.8478313625000002
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure