Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCTCGGGAAGCATCTGGTGAGCGAGG
..((.(((((((((((((((((&)))))).)))))))........)))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032017
GeneSymbolSTK40
Binding site1096,1126
Score0.846
Seed0
Au0.382
Energy-23.8
Binding len30
Me-9.076
Phylopstem0.9074568692307692
Phylopflank0.59546652
Longest consecutive pairings7
Position of longest consecutive pairings16
Pairings in 3prime end8
PositionCDS
2D Structure