Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCCAGAGGGGAGGCCTCCACCTCTGCTGCCTGGGGGTCCAGTGT
((((((((((((((((((.((.&)).)))))))))))).........................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032019
GeneSymbolHDAC10
Binding site1348,1395
Score0.923
Seed1
Au0.338
Energy-28.6
Binding len47
Me-3.938
Phylopstem2.422210783720931
Phylopflank2.2913077799999995
Longest consecutive pairings12
Position of longest consecutive pairings32
Pairings in 3prime end6
PositionCDS
2D Structure