Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCGTCCCTTCCCAACCAGCCGTGGGTGCCAGGTT
(((((((((.((..((......&.))..)).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032037
GeneSymbolTSSK6
Binding site1258,1292
Score0.846
Seed1
Au0.368
Energy-17.2
Binding len18
Me-7.326
Phylopstem1.0308261111111112
Phylopflank1.5020360937500001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure