Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTCAGCCAGGTG
(((((((..(((..........&)))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032040
GeneSymbolCCDC8
Binding site1344,1357
Score0.846
Seed1
Au0.382
Energy-15.4
Binding len13
Me-10.422
Phylopstem-0.4808345571428572
Phylopflank-1.09282179625
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure