Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCCTAGAGGGCAGATGCAGAGCAGGTGG
((((.(((((((((((((((..&)))))))))))........)))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032041
GeneSymbolNCALD
Binding site1726,1755
Score0.846
Seed0
Au0.426
Energy-23.5
Binding len29
Me-8.057
Phylopstem-0.3321896565217392
Phylopflank-0.16793340875000007
Longest consecutive pairings11
Position of longest consecutive pairings18
Pairings in 3prime end6
Position3UTR
2D Structure