Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCAGAAAGGAGAAAAATGATCCAGTA
.(((((((((((((((((....&)))))))))))).........))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032043
GeneSymbolBRIP1
Binding site3164,3191
Score1.0
Seed1
Au0.603
Energy-24.3
Binding len27
Me-3.793
Phylopstem-0.10320490692307695
Phylopflank-0.20736867125000005
Longest consecutive pairings12
Position of longest consecutive pairings15
Pairings in 3prime end4
PositionCDS
2D Structure