Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TATATTGTTAGACCAGGTA
(((((((..((((((((.....&))))))))..).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032047
GeneSymbolB3GNT5
Binding site2040,2059
Score0.846
Seed1
Au0.706
Energy-17.3
Binding len19
Me-7.308
Phylopstem0.17863812500000006
Phylopflank0.25089727500000003
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end3
Position3UTR
2D Structure