Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCCCGAAAGAGGAGCCGGA
..((((((((((((.((((...&))))..))..)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032050
GeneSymbolPATZ1
Binding site1774,1795
Score0.827
Seed1
Au0.368
Energy-24.0
Binding len21
Me-5.692
Phylopstem4.131444142857143
Phylopflank5.6900501775
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure