Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACTCGGTGTTTGAGGAGCAGGAAGAAGGCTCAGTGG
((((((((((((.(((((((((&))))))))).....)))))))............))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032053
GeneSymbolPCDHGA4
Binding site274,313
Score1.0
Seed1
Au0.426
Energy-24.7
Binding len39
Me-5.227
Phylopstem2.0778639166666664
Phylopflank0.5317522312499999
Longest consecutive pairings9
Position of longest consecutive pairings30
Pairings in 3prime end8
PositionCDS
2D Structure