Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&TGATAATGTACCAGAAGTGGTT
....(((((((((((((((..&.))))))))))))))).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_032086
GeneSymbolPCDHGA6
Binding site1215,1237
Score1.0
Seed0
Au0.618
Energy-18.5
Binding len17
Me-9.547
Phylopstem-0.1911913666666668
Phylopflank1.1095386812499997
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure