Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGGCCAGTGACCTGGAGCCGC
...(((((((...((((.((((&)))).))))......))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032095
GeneSymbolPCDHGB1
Binding site1460,1483
Score0.846
Seed0
Au0.397
Energy-22.9
Binding len23
Me-13.975
Phylopstem-0.2651344085714286
Phylopflank0.8055993337499998
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure