Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCAGGCCTTGCAGATAAATAATGGAGCATGCAGTGA
((((((((((..(((((((.((&))))))))).................)))))...))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032102
GeneSymbolSRSF8
Binding site1910,1950
Score0.846
Seed1
Au0.529
Energy-21.9
Binding len40
Me-10.109
Phylopstem2.776081461538462
Phylopflank2.6670769375
Longest consecutive pairings9
Position of longest consecutive pairings31
Pairings in 3prime end7
Position3UTR
2D Structure