Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCGGGGCCGCAGGACGCTGAGACGGTTTGGGGGTGGGTGG
((((.((((((((((((((((.&))))))))))......................)))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032108
GeneSymbolSEMA6B
Binding site3031,3075
Score0.846
Seed0
Au0.353
Energy-27.8
Binding len44
Me-8.057
Phylopstem4.151591236842104
Phylopflank4.498892150000001
Longest consecutive pairings10
Position of longest consecutive pairings34
Pairings in 3prime end7
Position3UTR
2D Structure