Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGAGGCAGAGATCGCAGTGA
(((((((((((((((((((...&))))))))))..)))..).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032120
GeneSymbolRBM48
Binding site3805,3830
Score0.923
Seed1
Au0.515
Energy-22.6
Binding len25
Me-3.938
Phylopstem0.01026129166666667
Phylopflank-0.11871673500000002
Longest consecutive pairings10
Position of longest consecutive pairings15
Pairings in 3prime end5
Position3UTR
2D Structure