Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCAGAGCTCCAGCCGGA
..((((((...(((((((((((&)))))))))))....)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032129
GeneSymbolPLEKHN1
Binding site3013,3035
Score0.846
Seed1
Au0.338
Energy-26.5
Binding len22
Me-10.081
Phylopstem-0.6151791181818183
Phylopflank-0.7334396175
Longest consecutive pairings11
Position of longest consecutive pairings11
Pairings in 3prime end8
Position3UTR
2D Structure