Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTAACCACATGAACTAACCTGCGTCAGCAGTTGCAGA
((((((((((...(((.((((&.)))))))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047420067
GeneSymbolAVL9
Binding site5704,5745
Score1.0
Seed1
Au0.529
Energy-22.5
Binding len22
Me-11.398
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure