Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCTCCCAGGCCTAACACTCAGGAGAGTGGATCAGCAAAACCAGTGT
(((((((((((.((((((..((&))..))))))..........)))))...............)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032149
GeneSymbolC4orf17
Binding site1307,1354
Score0.846
Seed1
Au0.529
Energy-20.2
Binding len47
Me-7.284
Phylopstem0.3195883923076925
Phylopflank0.79024299875
Longest consecutive pairings6
Position of longest consecutive pairings37
Pairings in 3prime end6
PositionCDS
2D Structure