Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((((.&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032151
GeneSymbolPCBD2
Binding site1519,1542
Score0.923
Seed1
Au0.397
Energy-31.2
Binding len23
Me-10.109
Phylopstem0.25336009090909095
Phylopflank-0.05463124999999999
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure