Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCTCCGTTGTCTGCTTGGTC
(((.((((.((((((.((((((&)))))).)))))).)))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032172
GeneSymbolUSP42
Binding site4773,4796
Score0.846
Seed0
Au0.529
Energy-19.7
Binding len23
Me-8.259
Phylopstem2.3521300000000003
Phylopflank2.9690073125
Longest consecutive pairings6
Position of longest consecutive pairings17
Pairings in 3prime end7
Position3UTR
2D Structure