Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGAACCCAGAGCTCTGAGAGCCGAGTGT
((((((((((.(((((((((((&)))..))))))))....).))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032174
GeneSymbolTOMM40L
Binding site2187,2217
Score0.846
Seed1
Au0.5
Energy-23.6
Binding len30
Me-6.762
Phylopstem0.48856677692307693
Phylopflank0.34469076249999997
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end8
Position3UTR
2D Structure