Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCCGAATGGAGGACTCTGGGCCCCTTAGAGACATCAAGGAGCTGGTGC
((((((((((((((.((((((.&)))))).)))..............................))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032223
GeneSymbolPCNX3
Binding site983,1035
Score0.846
Seed1
Au0.412
Energy-26.8
Binding len52
Me-4.673
Phylopstem1.1420626409090906
Phylopflank2.2886298050000002
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure