Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACTGCAGTAGCCAGTGG
.((((((.(((...(((((...&)))))....)))))))).).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_047420100
GeneSymbolLSM5
Binding site722,742
Score0.846
Seed1
Au0.662
Energy-15.7
Binding len20
Me-11.6
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings3
Pairings in 3prime end5
Position3UTR
2D Structure