Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACTCAGGAAGTATCTCTTGGTTTCTTATTCAGCAGCAGAGTTGGTGA
(((((((((((((((((((...&))))))))))...........................))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032256
GeneSymbolTMEM117
Binding site2139,2186
Score0.923
Seed1
Au0.574
Energy-20.6
Binding len47
Me-3.938
Phylopstem0.7385328565217393
Phylopflank1.18718596125
Longest consecutive pairings10
Position of longest consecutive pairings37
Pairings in 3prime end5
Position3UTR
2D Structure