Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCATGAGGCAGAGAGGAACATAGCTTTGCGTTCAAGTTTAGAGTGG
(((((((((((((((((((((.&)))))......))))))))).....)))................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032260
GeneSymbolRGPD5
Binding site1093,1142
Score1.0
Seed1
Au0.559
Energy-20.1
Binding len49
Me-3.938
Phylopstem2.482324029166667
Phylopflank2.9009163362500003
Longest consecutive pairings9
Position of longest consecutive pairings29
Pairings in 3prime end7
PositionCDS
2D Structure