Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCTAGGACACGTGTGTCAGA
..(((((((((..(.(((((((&))))))).)....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032266
GeneSymbolC2orf16
Binding site12361,12384
Score0.872
Seed1
Au0.588
Energy-17.7
Binding len23
Me-10.328
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure