Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCAGCTTGTGTGTCCAGGA
.((((((((((((.((......&.))))))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032276
GeneSymbolRHBDD1
Binding site1777,1796
Score0.846
Seed1
Au0.485
Energy-18.4
Binding len17
Me-4.65
Phylopstem-0.8384570769230769
Phylopflank-0.40716682349999994
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end2
Position3UTR
2D Structure