Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCTGGAGTGCCCCGTGTTTGACTTGGCAGCGGGTGTGGAGCCAT
...(((((((.(((((((((((&))))))))))).............................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032276
GeneSymbolRHBDD1
Binding site1439,1487
Score0.846
Seed0
Au0.338
Energy-23.1
Binding len48
Me-9.339
Phylopstem-0.14273336363636366
Phylopflank-0.18630559887499998
Longest consecutive pairings11
Position of longest consecutive pairings37
Pairings in 3prime end8
Position3UTR
2D Structure