Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCCAGGCTAGAGTGCAGTGG
(((((((((...(((((((((.&)))))))))...)))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032279
GeneSymbolATP13A4
Binding site6512,6535
Score0.923
Seed1
Au0.397
Energy-24.4
Binding len23
Me-11.352
Phylopstem1.964189633333333
Phylopflank2.2286708914999998
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure