Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTATATTGGTAAGACTAGTACCTGCCAGGG
.(((((((..((((((((....&))))))))..............))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032287
GeneSymbolRTL6
Binding site3052,3082
Score0.846
Seed1
Au0.456
Energy-19.1
Binding len30
Me-6.092
Phylopstem0.23244575000000006
Phylopflank-0.45438745875
Longest consecutive pairings8
Position of longest consecutive pairings22
Pairings in 3prime end4
Position3UTR
2D Structure