Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCATCCAGGAATGGAGTCCATGTAATCAAAGTGA
(((((((((((((((((((.((&)).))))))))).))))))...........)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032303
GeneSymbolHSDL2
Binding site2831,2866
Score0.872
Seed1
Au0.603
Energy-22.8
Binding len35
Me-3.938
Phylopstem-0.028651254838709683
Phylopflank0.05957882374999998
Longest consecutive pairings9
Position of longest consecutive pairings23
Pairings in 3prime end7
Position3UTR
2D Structure