Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCAGCGAGCTGCCC
....(((..(((.(((((((((&))))))))).)))..))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032307
GeneSymbolC9orf64
Binding site16,35
Score0.846
Seed0
Au0.344
Energy-23.6
Binding len19
Me-14.206
Phylopstem0.9892671111111111
Phylopflank0.7290182920833334
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end8
Position5UTR
2D Structure