Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCTAATGCCTGACCCACACAGTGAGGAGGGAGCCCAGG
..(((((((((((((((((((.&))))))....................))))))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032316
GeneSymbolNICN1
Binding site327,368
Score0.846
Seed1
Au0.456
Energy-25.4
Binding len41
Me-4.957
Phylopstem-0.4609834599999999
Phylopflank0.1485449625000001
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end7
PositionCDS
2D Structure