Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGAGAGCTGTGGAACTAGGGGTCC
.(((((((((((.((((((((&)))))))).))))).......)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_032316
GeneSymbolNICN1
Binding site2640,2668
Score0.923
Seed1
Au0.412
Energy-30.7
Binding len28
Me-5.082
Phylopstem1.2556918055555555
Phylopflank3.1951497112499996
Longest consecutive pairings8
Position of longest consecutive pairings20
Pairings in 3prime end8
Position3UTR
2D Structure