Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTGCGCTCTGTTGCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((((.&.)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032317
GeneSymbolDNAJC30
Binding site1507,1542
Score0.923
Seed1
Au0.397
Energy-28.9
Binding len24
Me-10.109
Phylopstem0.4281920000000001
Phylopflank0.3638039437499999
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure