Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCGCGGCGGCCGCCGATGGAGTTCACTTGAGCTGTGAA
((((((((((((((((..(((&)))....))))))))................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047420170
GeneSymbolAUTS2
Binding site116,156
Score1.0
Seed1
Au0.265
Energy-21.7
Binding len40
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings25
Pairings in 3prime end6
Position5UTR
2D Structure