Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCTATCGGGGATTGGTGCCAGGA
.((((((((.((((((((((((&)))))))).....)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032338
GeneSymbolLLPH
Binding site5388,5414
Score0.923
Seed1
Au0.544
Energy-21.5
Binding len26
Me-5.036
Phylopstem0.40193221176470584
Phylopflank0.1052865905
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure