Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCTCCACGCCAGCGAGGCCCAGGAGGGACTCCAGAAGTTCAAGGTGGTGAGAGCTGGTGT
(((((((((((((((((((...&.))))))))))))........................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032357
GeneSymbolCCDC115
Binding site238,302
Score0.846
Seed1
Au0.338
Energy-26.9
Binding len45
Me-3.938
Phylopstem0.16166616930232564
Phylopflank-0.08495227899999999
Longest consecutive pairings12
Position of longest consecutive pairings32
Pairings in 3prime end5
PositionCDS
2D Structure