Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAAGCATCAGATGGTGAAGGAGAAGGAGACACAGA
..(((((((((((((((((...&))))))))....................))))).).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032359
GeneSymbolCMSS1
Binding site176,216
Score0.846
Seed1
Au0.485
Energy-20.3
Binding len40
Me-4.957
Phylopstem1.3232616410256413
Phylopflank1.4017169800000004
Longest consecutive pairings8
Position of longest consecutive pairings32
Pairings in 3prime end5
PositionCDS
2D Structure