Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTAACCCCCAGAATACTGGTAGGGGCCAA
...(((((((((((((((....&.))))))).......)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032403
GeneSymbolPCDHGC3
Binding site645,674
Score0.923
Seed0
Au0.456
Energy-23.7
Binding len24
Me-6.515
Phylopstem1.7052077090909092
Phylopflank1.92759169
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure