Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACATTTTTGGGACTCGGGAATTATGAGGTAGAGGTGGAGGCGGAGCCGGATGT
(((((((((((((((((((...&.))))))))).....................)))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032405
GeneSymbolTMPRSS3
Binding site84,140
Score0.821
Seed1
Au0.426
Energy-22.4
Binding len43
Me-3.938
Phylopstem-0.3147357756097561
Phylopflank-0.44454162625000004
Longest consecutive pairings9
Position of longest consecutive pairings33
Pairings in 3prime end5
Position5UTR
2D Structure