Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGAAATATATTGTTAGTGCCTGGTA
(((.(((((((((((((..(((&)))..))))))))..))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_032410
GeneSymbolHOOK3
Binding site2138,2163
Score0.846
Seed0
Au0.603
Energy-17.5
Binding len25
Me-6.97
Phylopstem4.746974
Phylopflank5.767398672500001
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end6
PositionCDS
2D Structure