Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCGAGAGACTTTCTTTAGGAGCCAGG
..(((((((((((((.((((((&)))))).)))).........))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032410
GeneSymbolHOOK3
Binding site11054,11084
Score0.846
Seed1
Au0.632
Energy-29.8
Binding len30
Me-5.19
Phylopstem0.13225351363636367
Phylopflank0.4402946687499999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure