Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((.((&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032410
GeneSymbolHOOK3
Binding site5518,5541
Score0.846
Seed1
Au0.368
Energy-26.9
Binding len23
Me-10.109
Phylopstem-0.004619090909090921
Phylopflank-0.17210122875000008
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure