Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGCATGTGGCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAGTCA
.((((((((((((((((((((&)))))..........................)))))))...)))))...))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_032410
GeneSymbolHOOK3
Binding site4389,4442
Score0.846
Seed1
Au0.441
Energy-24.7
Binding len53
Me-3.793
Phylopstem0.22947378846153835
Phylopflank0.07407667500000004
Longest consecutive pairings7
Position of longest consecutive pairings15
Pairings in 3prime end8
Position3UTR
2D Structure