Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACACCCCTGTCACCCCTCGCCCGCAAGCCCAGGGAGTGGTCAGC
..((((((.((((((((((...&.)))))))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032417
GeneSymbolSPANXD
Binding site88,135
Score0.827
Seed1
Au0.324
Energy-25.3
Binding len19
Me-6.013
Phylopstem-0.16035012
Phylopflank-0.38683776625
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end5
Position5UTR
2D Structure