Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGTGGGGGTGGGGA
...((((((..(((.((((((&)))))).))).)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_032420
GeneSymbolPCDH1
Binding site4716,4734
Score1.0
Seed0
Au0.368
Energy-25.7
Binding len18
Me-11.317
Phylopstem1.0278518333333333
Phylopflank0.79503396
Longest consecutive pairings6
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure