Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCGGCAGTACCTCCTCCAGGCAGGAGCCGGG
..(((((((((..((((((((.&)))))))).................))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032421
GeneSymbolCLIP2
Binding site3482,3517
Score0.846
Seed1
Au0.397
Energy-27.5
Binding len35
Me-9.593
Phylopstem0.6072735555555557
Phylopflank0.5674426699999998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure